Tag Archives: bioinformatics

Which prostate cancers can be left alone?

Only 10 per cent of prostate cancers are lethal, but which ones? Australian researchers have tracked the mutations that drive the cancer to spread through the body, and eventually become lethal.

Bioinformaticians can use Circos plots to visualise how cancer genomes differ from healthy ones. Credit: Peter Casamento
Bioinformaticians can use Circos plots to visualise how cancer genomes differ from healthy ones. Credit: Peter Casamento

The research shows they can be detected in the original tumour and even in blood samples. Testing the DNA of prostate cancer cells may help clinicians in the future identify which cancers need to be urgently removed and which ones might simply be monitored.

“Some advanced cancer cells evolve the ability to break away from their original location, travel through the bloodstream and create secondary tumours in another part of the body,” explains Clare Sloggett, Bioinformatician and Research Fellow at the Victorian Life Sciences Computation Initiative (VLSCI). “Cells in this state of metastasis are the most deadly.”

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Parasites betrayed by their genome

Photo: The barber’s pole worm causes deaths and massive production losses in the sheep industry. Credit:IstockphotoMelbourne veterinary researchers are using genomic techniques and bioinformatics to lead them to new specific candidate drugs for the treatment of a devastating parasite known as barber’s pole worm, which causes anaemia, deaths and massive production losses in the sheep industry.

Using the latest gene sequencing technology and the supercomputers of the Victorian Life Sciences Computation Initiative, Prof Robin Gasser’s research group from the University of Melbourne’s Veterinary School have been able to compare barber’s pole worm’s DNA and RNA with that of other organisms in order to track down genes essential to the worm’s growth, development, reproduction and survival. Continue reading Parasites betrayed by their genome